Pre-prints
Shah SN, Knausenberger TBA, Connell E, Le Gall G, Hardy TAJ, Randall DW, McCafferty K, Yaqoob MM, Solito E, Müller M, Stachulski AV, Glen RC, Vauzour D, Hoyles L, McArthur S. Cerebrovascular damage caused by the gut microbe/host co-metabolite p-cresol sulfate is prevented by blockade of the EGF receptor. bioRxiv 2022.11.12.516113; doi: 10.1101/2022.11.12.516113v2.
Chilloux J, Brial F, Everard A, Smyth D, Zhang L, Plovier H, Myridakis A, Hoyles L, Fuchs JE, Blancher C, Gencer S, Martinez-Gili L, Fearnside JF, Barton RH, Neves AL, Rothwell AR, Gérard C, Calderari S, Boulangé CL, Patel S, Scott J, Glen RC, Gooderham NJ, Nicholson JK, Gauguier D, Liu PP, Cani PD, Dumas ME. Inhibition of IRAK4 by microbial trimethylamine blunts metabolic inflammation and ameliorates glycemic control. bioRxiv 277434; doi: 10.1101/277434v2.
2024
Hoyles L. Gut microbiome and hepatic steatosis (steatotic liver disease). In Gut Microbiome, Microbial Metabolites and Cardiometabolic Risk, pp. 177–197. Edited by Massimo Federici and Rossella Menghini. Springer Link. doi: 10.1007/978-3-031-35064-1_7.
2023
Walker AW, Hoyles L. Human microbiome myths and misconceptions. Nat Microbiol. 2023 Aug;8(8):1392-1396. doi: 10.1038/s41564-023-01426-7.
Andrikopoulos P, Aron-Wisnewsky J, Chakaroun R, Myridakis A, Forslund SK, Nielsen T, Adriouch S, Holmes B, Chilloux J, Vieira-Silva S, Falony G, Salem JE, Andreelli F, Belda E, Kieswich J, Chechi K, Puig-Castellvi F, Chevalier M, Le Chatelier E, Olanipekun MT, Hoyles L, Alves R, Helft G, Isnard R, Køber L, Coelho LP, Rouault C, Gauguier D, Gøtze JP, Prifti E, Froguel P; MetaCardis Consortium; Zucker JD, Bäckhed F, Vestergaard H, Hansen T, Oppert JM, Blüher M, Nielsen J, Raes J, Bork P, Yaqoob MM, Stumvoll M, Pedersen O, Ehrlich SD, Clément K, Dumas ME. Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide. Nat Commun. 2023 Sep 20;14(1):5843. doi: 10.1038/s41467-023-39824-4.
Molinaro A, Nemet I, Bel Lassen P, Chakaroun R, Nielsen T, Aron-Wisnewsky J, Bergh PO, Li L, Henricsson M, Køber L, Isnard R, Helft G, Stumvoll M, Pedersen O, Smith JG, Tang WHW, Clément K, Hazen SL, Bäckhed F; MetaCardis Consortium. Microbially produced imidazole propionate is associated with heart failure and mortality. JACC Heart Fail. 2023 Jul;11(7):810-821. doi: 10.1016/j.jchf.2023.03.008.
McCartney AL, Hoyles L. The role of Klebsiella populations in preterm infants. Biochem Soc Trans. 51(2):887-896. doi: 10.1042/BST20200325.
Quesada-Vázquez S, Castells-Nobau A, Latorre J, Oliveras-Cañellas N, Puig-Parnau I, Tejera N, Tobajas Y, Baudin J, Hildebrand F, Beraza N, Burcelin R, Martinez-Gili L, Chilloux J, Dumas ME, Federici M, Hoyles L, Caimari A, Del Bas JM, Escoté X, Fernández-Real JM, Mayneris-Perxachs J. Potential therapeutic implications of histidine catabolism by the gut microbiota in NAFLD patients with morbid obesity. Cell Rep Med. 2023 Dec 19;4(12):101341. doi: 10.1016/j.xcrm.2023.101341.
Eladawy M, Thomas JC, Hoyles L. Phenotypic and genomic characterization of Pseudomonas aeruginosa isolates recovered from catheter-associated urinary tract infections in an Egyptian hospital. Microb Genom. 2023 Oct;9(10):001125. doi: 10.1099/mgen.0.001125.
Negus D, Foster G, Hoyles L. Lelliottia amnigena recovered from the lung of a harbour porpoise, and comparative analyses with Lelliottia spp. Access Microbiol. 2023 Nov 9;5(11):000694.v3. doi: 10.1099/acmi.0.000694.v3.
English J, Newberry F, Hoyles L, Patrick S, Stewart L. Genomic analyses of Bacteroides fragilis: subdivisions I and II represent distinct species. J Med Microbiol. 2023 Nov;72(11). doi: 10.1099/jmm.0.001768.
Newberry F, Shibu P, Smith-Zaitlik T, Eladawy M, McCartney AL, Hoyles L, Negus D. Lytic bacteriophage vB_KmiS-Kmi2C disrupts biofilms formed by members of the Klebsiella oxytoca complex, and represents a novel virus family and genus. J Appl Microbiol. 134(4):lxad079. doi: 10.1093/jambio/lxad079.
Alexander JA, Posma JM, Scott A, et al. Pathobionts in the tumour microbiota predict survival following resection for colorectal cancer. Microbiome. 11(1):100. doi: 10.1186/s40168-023-01518-w.
Randall DW, Kieswich J, Hoyles L, McCafferty K, Curtis M, Yaqoob MM. Gut dysbiosis in experimental kidney disease: a meta-analysis of rodent repository data. J Am Soc Nephrol. doi: 10.1681/ASN.0000000000000071.
Stachulski AV, Knausenberger TB, Shah SN, Hoyles L, McArthur S. A host-gut microbial amino acid co-metabolite, p-cresol glucuronide, promotes blood- brain barrier integrity in vivo. Tissue Barriers. 2023 Jan 2;11(1):2073175. doi: 10.1080/21688370.2022.2073175.
2022
Penney NC, Yeung DKT, Garcia-Perez I, Posma JM, Kopytek A, Garratt B, Ashrafian H, Frost G, Marchesi JR, Purkayastha S, Hoyles L, Darzi A, Holmes E. Multi-omic phenotyping reveals host-microbe responses to bariatric surgery, glycaemic control and obesity. Commun Med (Lond). 2022 Oct 7;2:127. doi: 10.1038/s43856-022-00185-6.
Smith-Zaitlik T, Shibu P, McCartney AL, Foster G, Hoyles L, Negus D. Extended genomic analyses of the broad-host-range phages vB_KmiM-2Di and vB_KmiM-4Dii reveal slopekviruses have highly conserved genomes. Microbiology (Reading). 2022 Sep;168(9). doi: 10.1099/mic.0.001247.
Noble A, Pring ET, Durant L, Man R, Dilke SM, Hoyles L, James SA, Carding SR, Jenkins JT, Knight SC. Altered immunity to microbiota, B cell activation and depleted γδ/resident memory T cells in colorectal cancer. Cancer Immunol Immunother. 2022 Nov;71(11):2619-2629. doi: 10.1007/s00262-021-03135-8.
Noble A, Durant L, Dilke SM, Man R, Martin I, Patel R, Hoyles L, Pring ET, Latchford A, Clark SK, Carding SR, Knight SC. Altered mucosal immune-microbiota interactions in familial adenomatous polyposis. Clin Transl Gastroenterol. 2022 Jul 1;13(7):e00428. doi: 10.14309/ctg.0000000000000428.
Fromentin S, Forslund SK, Chechi K, Aron-Wisnewsky J, Chakaroun R, Nielsen T, Tremaroli V, Ji B, Prifti E, Myridakis A, Chilloux J, Andrikopoulos P, Fan Y, Olanipekun MT, Alves R, Adiouch S, Bar N, Talmor-Barkan Y, Belda E, Caesar R, Coelho LP, Falony G, Fellahi S, Galan P, Galleron N, Helft G, Hoyles L, Isnard R, Le Chatelier E, Julienne H, Olsson L, Pedersen HK, Pons N, Quinquis B, Rouault C, Roume H, Salem JE, Schmidt TSB, Vieira-Silva S, Li P, Zimmermann- Kogadeeva M, Lewinter C, Søndertoft NB, Hansen TH, Gauguier D, Gøtze JP, Køber L, Kornowski R, Vestergaard H, Hansen T, Zucker JD, Hercberg S, Letunic I, Bäckhed F, Oppert JM, Nielsen J, Raes J, Bork P, Stumvoll M, Segal E, Clément K, Dumas ME, Ehrlich SD, Pedersen O. Microbiome and metabolome features of the cardiometabolic disease spectrum. Nat Med. 2022 Feb;28(2):303-314. doi: 10.1038/s41591-022-01688-4.
Menghini R, Hoyles L, Cardellini M, Casagrande V, Marino A, Gentileschi P, Davato F, Mavilio M, Arisi I, Mauriello A, Montanaro M, Scimeca M, Barton RH, Rappa F, Cappello F, Vinciguerra M, Moreno-Navarrete JM, Ricart W, Porzio O, Fernández-Real JM, Burcelin R, Dumas ME, Federici M. ITCH E3 ubiquitin ligase downregulation compromises hepatic degradation of branched-chain amino acids. Mol Metab. 2022 May;59:101454. doi: 10.1016/j.molmet.2022.101454.
Chakrabarti A, Geurts L, Hoyles L, Iozzo P, Kraneveld AD, La Fata G, Miani M, Patterson E, Pot B, Shortt C, Vauzour D. The microbiota-gut-brain axis: pathways to better brain health. Perspectives on what we know, what we need to investigate and how to put knowledge into practice. Cell Mol Life Sci. 2022 Jan 19;79(2):80. doi: 10.1007/s00018-021-04060-w.
Belda E, Voland L, Tremaroli V, Falony G, Adriouch S, Assmann KE, Prifti E, Aron-Wisnewsky J, Debédat J, Le Roy T, Nielsen T, Amouyal C, André S, Andreelli F, Blüher M, Chakaroun R, Chilloux J, Coelho LP, Dao MC, Das P, Fellahi S, Forslund S, Galleron N, Hansen TH, Holmes B, Ji B, Krogh Pedersen H, Le P, Le Chatelier E, Lewinter C, Mannerås-Holm L, Marquet F, Myridakis A, Pelloux V, Pons N, Quinquis B, Rouault C, Roume H, Salem JE, Sokolovska N, Søndertoft NB, Touch S, Vieira-Silva S; MetaCardis Consortium; Galan P, Holst J, Gøtze JP, Køber L, Vestergaard H, Hansen T, Hercberg S, Oppert JM, Nielsen J, Letunic I, Dumas ME, Stumvoll M, Pedersen OB, Bork P, Ehrlich SD, Zucker JD, Bäckhed F, Raes J, Clément K. Impairment of gut microbial biotin metabolism and host biotin status in severe obesity: effect of biotin and prebiotic supplementation on improved metabolism. Gut. 2022 Dec;71(12):2463-2480. doi: 10.1136/gutjnl-2021-325753.
2021
Vrijheid M, Basagaña X, Gonzalez JR, Jaddoe VWV, Jensen G, Keun HC, McEachan RRC, Porcel J, Siroux V, Swertz MA, Thomsen C, Aasvang GM, Andrušaitytė S, Angeli K, Avraam D, Ballester F, Burton P, Bustamante M, Casas M, Chatzi L, Chevrier C, Cingotti N, Conti D, Crépet A, Dadvand P, Duijts L, van Enckevort E, Esplugues A, Fossati S, Garlantezec R, Gómez Roig MD, Grazuleviciene R, Gützkow KB, Guxens M, Haakma S, Hessel EVS, Hoyles L, Hyde E, Klanova J, van Klaveren JD, Kortenkamp A, Le Brusquet L, Leenen I, Lertxundi A, Lertxundi N, Lionis C, Llop S, Lopez-Espinosa MJ, Lyon-Caen S, Maitre L, Mason D, Mathy S, Mazarico E, Nawrot T, Nieuwenhuijsen M, Ortiz R, Pedersen M, Perelló J, Pérez-Cruz M, Philippat C, Piler P, Pizzi C, Quentin J, Richiardi L, Rodriguez A, Roumeliotaki T, Sabin Capote JM, Santiago L, Santos S, Siskos AP, Strandberg-Larsen K, Stratakis N, Sunyer J, Tenenhaus A, Vafeiadi M, Wilson RC, Wright J, Yang T, Slama R. Advancing tools for human early lifecourse exposome research and translation (ATHLETE): project overview. Environ Epidemiol. 2021 Oct 1;5(5):e166. doi: 10.1097/EE9.0000000000000166.
Forslund SK, Chakaroun R, Zimmermann-Kogadeeva M, Markó L, Aron-Wisnewsky J, Nielsen T, Moitinho-Silva L, Schmidt TSB, Falony G, Vieira-Silva S, Adriouch S, Alves RJ, Assmann K, Bastard JP, Birkner T, Caesar R, Chilloux J, Coelho LP, Fezeu L, Galleron N, Helft G, Isnard R, Ji B, Kuhn M, Le Chatelier E, Myridakis A, Olsson L, Pons N, Prifti E, Quinquis B, Roume H, Salem JE, Sokolovska N, Tremaroli V, Valles-Colomer M, Lewinter C, Søndertoft NB, Pedersen HK, Hansen TH; MetaCardis Consortium; Gøtze JP, Køber L, Vestergaard H, Hansen T, Zucker JD, Hercberg S, Oppert JM, Letunic I, Nielsen J, Bäckhed F, Ehrlich SD, Dumas ME, Raes J, Pedersen O, Clément K, Stumvoll M, Bork P. Combinatorial, additive and dose-dependent drug-microbiome associations. Nature. 2021 Dec;600(7889):500-505. doi: 10.1038/s41586-021-04177-9.
Hoyles L, Pontifex MG, Rodriguez-Ramiro I, Anis-Alavi MA, Jelane KS, Snelling T, Solito E, Fonseca S, Carvalho AL, Carding SR, Müller M, Glen RC, Vauzour D, McArthur S. Regulation of blood-brain barrier integrity by microbiome-associated methylamines and cognition by trimethylamine N-oxide. Microbiome. 2021 Nov 27;9(1):235. doi: 10.1186/s40168-021-01181-z.
Nalpas N, Hoyles L, Anselm V, Ganief T, Martinez-Gili L, Grau C, Droste- Borel I, Davidovic L, Altafaj X, Dumas ME, Macek B. An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome. Gut Microbes. 2021 Jan-Dec;13(1):1994836. doi: 10.1080/19490976.2021.1994836.
Hsieh SY, Tariq MA, Telatin A, Ansorge R, Adriaenssens EM, Savva GM, Booth C, Wileman T, Hoyles L, Carding SR. Comparison of PCR versus PCR-free DNA library preparation for characterising the human faecal virome. Viruses. 2021 Oct 18;13(10):2093. doi: 10.3390/v13102093.
Shibu P, McCuaig F, McCartney AL, Kujawska M, Hall LJ, Hoyles L. Improved molecular characterization of the Klebsiella oxytoca complex reveals the prevalence of the kleboxymycin biosynthetic gene cluster. Microb Genom. 2021 Jun;7(6):000592. doi: 10.1099/mgen.0.000592.
Mayneris-Perxachs J, Cardellini M, Hoyles L, Latorre J, Davato F, Moreno- Navarrete JM, Arnoriaga-Rodríguez M, Serino M, Abbott J, Barton RH, Puig J, Fernández-Real X, Ricart W, Tomlinson C, Woodbridge M, Gentileschi P, Butcher SA, Holmes E, Nicholson JK, Pérez-Brocal V, Moya A, Clain DM, Burcelin R, Dumas ME, Federici M, Fernández-Real JM. Iron status influences non-alcoholic fatty liver disease in obesity through the gut microbiome. Microbiome. 2021 May 7;9(1):104. doi: 10.1186/s40168-021-01052-7.
2020
Brial F, Chilloux J, Nielsen T, Vieira-Silva S, Falony G, Andrikopoulos P, Olanipekun M, Hoyles L, Djouadi F, Neves AL, Rodriguez-Martinez A, Mouawad GI, Pons N, Forslund S, Le-Chatelier E, Le Lay A, Nicholson J, Hansen T, Hyötyläinen T, Clément K, Oresic M, Bork P, Ehrlich SD, Raes J, Pedersen OB, Gauguier D, Dumas ME. Human and preclinical studies of the host-gut microbiome co-metabolite hippurate as a marker and mediator of metabolic health. Gut. 2021 Nov;70(11):2105-2114. doi: 10.1136/gutjnl-2020-323314.
Tariq MA, Newberry F, Haagmans R, Booth C, Wileman T, Hoyles L, Clokie MRJ, Ebdon J, Carding SR. Genome characterization of a novel wastewater Bacteroides fragilis bacteriophage (vB_BfrS_23) and its host GB124. Front Microbiol. 2020 Oct 23;11:583378. doi: 10.3389/fmicb.2020.583378.
D'Amato A, Di Cesare Mannelli L, Lucarini E, Man AL, Le Gall G, Branca JJV, Ghelardini C, Amedei A, Bertelli E, Regoli M, Pacini A, Luciani G, Gallina P, Altera A, Narbad A, Gulisano M, Hoyles L, Vauzour D, Nicoletti C. Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients. Microbiome. 2020 Oct 1;8(1):140. doi: 10.1186/s40168-020-00914-w.
Kujawska M, La Rosa SL, Roger LC, Pope PB, Hoyles L, McCartney AL, Hall LJ. Succession of Bifidobacterium longum strains in response to a changing early life nutritional environment reveals dietary substrate adaptations. iScience. 2020 Aug 21;23(8):101368. doi: 10.1016/j.isci.2020.101368.
Letertre MPM, Munjoma N, Wolfer K, Pechlivanis A, McDonald JAK, Hardwick RN, Cherrington NJ, Coen M, Nicholson JK, Hoyles L, Swann JR, Wilson ID. A Two-Way interaction between methotrexate and the gut microbiota of male Sprague-Dawley rats. J Proteome Res. 2020 Aug 7;19(8):3326-3339. doi: 10.1021/acs.jproteome.0c00230.
Durant L, Stentz R, Noble A, Brooks J, Gicheva N, Reddi D, O'Connor MJ, Hoyles L, McCartney AL, Man R, Pring ET, Dilke S, Hendy P, Segal JP, Lim DNF, Misra R, Hart AL, Arebi N, Carding SR, Knight SC. Bacteroides thetaiotaomicron- derived outer membrane vesicles promote regulatory dendritic cell responses in health but not in inflammatory bowel disease. Microbiome. 2020 Jun 8;8(1):88. doi: 10.1186/s40168-020-00868-z.
Chen Y, Brook TC, Soe CZ, O'Neill I, Alcon-Giner C, Leelastwattanagul O, Phillips S, Caim S, Clarke P, Hall LJ, Hoyles L. Preterm infants harbour diverse Klebsiella populations, including atypical species that encode and produce an array of antimicrobial resistance- and virulence-associated factors. Microb Genom. 2020 Jun;6(6):e000377. doi: 10.1099/mgen.0.000377.
Mayneris-Perxachs J, Puig J, Burcelin R, Dumas ME, Barton RH, Hoyles L, Federici M, Fernández-Real JM. The APOA1bp-SREBF-NOTCH axis is associated with reduced atherosclerosis risk in morbidly obese patients. Clin Nutr. 2020 Nov;39(11):3408-3418. doi: 10.1016/j.clnu.2020.02.034.
Herridge WP, Shibu P, O'Shea J, Brook TC, Hoyles L. Bacteriophages of Klebsiella spp., their diversity and potential therapeutic uses. J Med Microbiol. 2020 Feb;69(2):176-194. doi: 10.1099/jmm.0.001141.
Leggett RM, Alcon-Giner C, Heavens D, Caim S, Brook TC, Kujawska M, Martin S, Peel N, Acford-Palmer H, Hoyles L, Clarke P, Hall LJ, Clark MD. Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens. Nat Microbiol. 2020 Mar;5(3):430-442. doi: 10.1038/s41564-019-0626-z.
Noble A, Durant L, Hoyles L, McCartney AL, Man R, Segal J, Costello SP, Hendy P, Reddi D, Bouri S, Lim DNF, Pring T, O'Connor MJ, Datt P, Wilson A, Arebi N, Akbar A, Hart AL, Carding SR, Knight SC. Deficient resident memory T cell and CD8 T cell response to commensals in inflammatory bowel disease. J Crohns Colitis. 2020 May 21;14(4):525-537. doi: 10.1093/ecco-jcc/jjz175.
2019
Randall DW, Kieswich J, Swann J, McCafferty K, Thiemermann C, Curtis M, Hoyles L, Yaqoob MM. Batch effect exerts a bigger influence on the rat urinary metabolome and gut microbiota than uraemia: a cautionary tale. Microbiome. 2019 Sep 2;7(1):127. doi: 10.1186/s40168-019-0738-y.
Hoyles L. Spotlight on… Lesley Hoyles. FEMS Microbiol Lett. 2019 Jul 1;366(13):fnz156. doi: 10.1093/femsle/fnz156.
Chen Y, Brook TC, Alcon-Giner C, Clarke P, Hall LJ, Hoyles L. Draft genome sequences of Citrobacter freundii and Citrobacter murliniae strains isolated from the feces of preterm infants. Microbiol Resour Announc. 2019 Aug 15;8(33):e00494-19. doi: 10.1128/MRA.00494-19.
Chen Y, Brook TC, Alcon-Giner C, Clarke P, Hall LJ, Hoyles L. Draft genome sequence of Raoultella ornithinolytica P079F W, isolated from the feces of a preterm infant. Microbiol Resour Announc. 2019 Aug 15;8(33):e00493-19. doi: 10.1128/MRA.00493-19.
Dao MC, Sokolovska N, Brazeilles R, Affeldt S, Pelloux V, Prifti E, Chilloux J, Verger EO, Kayser BD, Aron-Wisnewsky J, Ichou F, Pujos-Guillot E, Hoyles L, Juste C, Doré J, Dumas ME, Rizkalla SW, Holmes BA, Zucker JD, Clément K; MICRO-Obes Consortium. A data integration multi-omics approach to study calorie restriction-induced changes in insulin sensitivity. Front Physiol. 2019 Feb 5;9:1958. doi: 10.3389/fphys.2018.01958.
2018
Hoyles L, Fernández-Real JM, Federici M, Serino M, Abbott J, Charpentier J, Heymes C, Luque JL, Anthony E, Barton RH, Chilloux J, Myridakis A, Martinez-Gili L, Moreno-Navarrete JM, Benhamed F, Azalbert V, Blasco-Baque V, Puig J, Xifra G, Ricart W, Tomlinson C, Woodbridge M, Cardellini M, Davato F, Cardolini I, Porzio O, Gentileschi P, Lopez F, Foufelle F, Butcher SA, Holmes E, Nicholson JK, Postic C, Burcelin R, Dumas ME. Molecular phenomics and metagenomics of hepatic steatosis in non-diabetic obese women. Nat Med. 2018 Jul;24(7):1070-1080. doi: 10.1038/s41591-018-0061-3.
Hoyles L, Jiménez-Pranteda ML, Chilloux J, Brial F, Myridakis A, Aranias T, Magnan C, Gibson GR, Sanderson JD, Nicholson JK, Gauguier D, McCartney AL, Dumas ME. Metabolic retroconversion of trimethylamine N-oxide and the gut microbiota. Microbiome. 2018 Apr 20;6(1):73. doi: 10.1186/s40168-018-0461-0.
Hoyles L, Snelling T, Umlai UK, Nicholson JK, Carding SR, Glen RC, McArthur S. Microbiome-host systems interactions: protective effects of propionate upon the blood-brain barrier. Microbiome. 2018 Mar 21;6(1):55. doi: 10.1186/s40168-018-0439-y.
2017
Carding SR, Davis N, Hoyles L. Review article: the human intestinal virome in health and disease. Aliment Pharmacol Ther. 2017 Nov;46(9):800-815. doi: 10.1111/apt.14280.
Dumas ME, Rothwell AR, Hoyles L, Aranias T, Chilloux J, Calderari S, Noll EM, Péan N, Boulangé CL, Blancher C, Barton RH, Gu Q, Fearnside JF, Deshayes C, Hue C, Scott J, Nicholson JK, Gauguier D. Microbial-Host Co-metabolites Are Prodromal Markers Predicting Phenotypic Heterogeneity in Behavior, Obesity, and Impaired Glucose Tolerance. Cell Rep. 2017 Jul 5;20(1):136-148. doi: 10.1016/j.celrep.2017.06.039.
2016
Bell ME, Lasker BA, Klenk HP, Hoyles L, Spröer C, Schumann P, Brown JM. Kroppenstedtia pulmonis sp. nov. and Kroppenstedtia sanguinis sp. nov., isolated from human patients. Antonie Van Leeuwenhoek. 2016 May;109(5):603-10. doi: 10.1007/s10482-016-0663-z.
Dao MC, Everard A, Aron-Wisnewsky J, Sokolovska N, Prifti E, Verger EO, Kayser BD, Levenez F, Chilloux J, Hoyles L; MICRO-Obes Consortium; Dumas ME, Rizkalla SW, Doré J, Cani PD, Clément K. Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology. Gut. 2016 Mar;65(3):426-36. doi: 10.1136/gutjnl-2014-308778.
2015
Hoyles L, Murphy J, Neve H, Heller KJ, Turton JF, Mahony J, Sanderson JD, Hudspith B, Gibson GR, McCartney AL, van Sinderen D. Klebsiella pneumoniae subsp. pneumoniae-bacteriophage combination from the caecal effluent of a healthy woman. PeerJ. 2015 Jul 28;3:e1061. doi: 10.7717/peerj.1061.
Shoaie S, Ghaffari P, Kovatcheva-Datchary P, Mardinoglu A, Sen P, Pujos- Guillot E, de Wouters T, Juste C, Rizkalla S, Chilloux J, Hoyles L, Nicholson JK; MICRO-Obes Consortium; Dore J, Dumas ME, Clement K, Bäckhed F, Nielsen J. Quantifying diet-induced metabolic changes of the human gut microbiome. Cell Metab. 2015 Aug 4;22(2):320-31. doi: 10.1016/j.cmet.2015.07.001.
Thorasin T, Hoyles L, McCartney AL. Dynamics and diversity of the 'Atopobium cluster' in the human faecal microbiota, and phenotypic characterization of 'Atopobium cluster' isolates. Microbiology (Reading). 2015 Mar;161(Pt 3):565-79. doi: 10.1099/mic.0.000016.
2014
Hoyles L, McCartney AL, Neve H, Gibson GR, Sanderson JD, Heller KJ, van Sinderen D. Characterization of virus-like particles associated with the human faecal and caecal microbiota. Res Microbiol. 2014 Dec;165(10):803-12. doi: 10.1016/j.resmic.2014.10.006.
2013
Russell WR, Hoyles L, Flint HJ, Dumas ME. Colonic bacterial metabolites and human health. Curr Opin Microbiol. 2013 Jun;16(3):246-54. doi: 10.1016/j.mib.2013.07.002.
Murphy J, Royer B, Mahony J, Hoyles L, Heller K, Neve H, Bonestroo M, Nauta A, van Sinderen D. Biodiversity of lactococcal bacteriophages isolated from 3 Gouda-type cheese-producing plants. J Dairy Sci. 2013 Aug;96(8):4945-57. doi: 10.3168/jds.2013-6748.
Hoyles L, Clear JA, McCartney AL. Use of denaturing gradient gel electrophoresis to detect Actinobacteria associated with the human faecal microbiota. Anaerobe. 2013 Aug;22:90-6. doi: 10.1016/j.anaerobe.2013.06.001.
Hoyles L, Ortman K, Cardew S, Foster G, Rogerson F, Falsen E. Corynebacterium uterequi sp. nov., a non-lipophilic bacterium isolated from urogenital samples from horses. Vet Microbiol. 2013 Aug 30;165(3-4):469-74. doi: 10.1016/j.vetmic.2013.03.025.
2012
Jiménez-Pranteda ML, Aguilera M, McCartney AL, Hoyles L, Jiménez-Valera M, Náder-Macías ME, Ramos-Cormenzana A, Monteoliva-Sánchez M. Investigation of the impact of feeding Lactobacillus plantarum CRL 1815 encapsulated in microbially derived polymers on the rat faecal microbiota. J Appl Microbiol. 2012 Aug;113(2):399-410. doi: 10.1111/j.1365-2672.2012.05343.x.
Foster G, Wragg P, Koylass MS, Whatmore AM, Hoyles L. Isolation of Actinomyces hyovaginalis from sheep and comparison with isolates obtained from pigs. Vet Microbiol. 2012 Jun 15;157(3-4):471-5. doi: 10.1016/j.vetmic.2012.01.003.
Hoyles L, Honda H, Logan NA, Halket G, La Ragione RM, McCartney AL. Recognition of greater diversity of Bacillus species and related bacteria in human faeces. Res Microbiol. 2012 Jan;163(1):3-13. doi: 10.1016/j.resmic.2011.10.004.
2011
Ogué-Bon E, Khoo C, Hoyles L, McCartney AL, Gibson GR, Rastall RA. In vitro fermentation of rice bran combined with Lactobacillus acidophilus 14 150B or Bifidobacterium longum 05 by the canine faecal microbiota. FEMS Microbiol Ecol. 2011 Mar;75(3):365-76. doi: 10.1111/j.1574-6941.2010.01014.x.
2010
Roberfroid M, Gibson GR, Hoyles L, McCartney AL, Rastall R, Rowland I, Wolvers D, Watzl B, Szajewska H, Stahl B, Guarner F, Respondek F, Whelan K, Coxam V, Davicco MJ, Léotoing L, Wittrant Y, Delzenne NM, Cani PD, Neyrinck AM, Meheust A. Prebiotic effects: metabolic and health benefits. Br J Nutr. 2010 Aug;104 Suppl 2:S1-63. doi: 10.1017/S0007114510003363.
Roger LC, Costabile A, Holland DT, Hoyles L, McCartney AL. Examination of faecal Bifidobacterium populations in breast- and formula-fed infants during the first 18 months of life. Microbiology (Reading). 2010 Nov;156(Pt 11):3329-3341. doi: 10.1099/mic.0.043224-0.
Martín-Peláez S, Costabile A, Hoyles L, Rastall RA, Gibson GR, La Ragione RM, Woodward MJ, Mateu E, Martín-Orúe SM. Evaluation of the inclusion of a mixture of organic acids or lactulose into the feed of pigs experimentally challenged with Salmonella Typhimurium. Vet Microbiol. 2010 May 19;142(3-4):337-45. doi: 10.1016/j.vetmic.2009.09.061.
2009
Hoyles L, McCartney AL. What do we mean when we refer to Bacteroidetes populations in the human gastrointestinal microbiota? FEMS Microbiol Lett. 2009 Oct;299(2):175-83. doi: 10.1111/j.1574-6968.2009.01741.x.
2008
Hoyles L, Vulevic J. Diet, immunity and functional foods. Adv Exp Med Biol. 2008;635:79-92. doi: 10.1007/978-0-387-09550-9_7.
2007
Tuohy KM, Pinart-Gilberga M, Jones M, Hoyles L, McCartney AL, Gibson GR. Survivability of a probiotic Lactobacillus casei in the gastrointestinal tract of healthy human volunteers and its impact on the faecal microflora. J Appl Microbiol. 2007 Apr;102(4):1026-32. doi: 10.1111/j.1365-2672.2006.03154.x.
2004
Euzéby JP, Hoyles L, Kämpfer P, Oren A, Saddler GS, Trüper HG, Tindall BJ. 'List of Changes in Taxonomic Opinion': making use of the new lists. Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1429-1430. doi: 10.1099/ijs.0.63375-0.
Collins MD, Hoyles L, Foster G, Falsen E. Corynebacterium caspium sp. nov., from a Caspian seal (Phoca caspica). Int J Syst Evol Microbiol. 2004 May;54(Pt 3):925-928. doi: 10.1099/ijs.0.02950-0.
Hoyles L, Collins MD, Foster G, Falsen E, Schumann P. Jeotgalicoccus pinnipedialis sp. nov., from a southern elephant seal (Mirounga leonina). Int J Syst Evol Microbiol. 2004 May;54(Pt 3):745-748. doi: 10.1099/ijs.0.02833-0.
Hoyles L, Collins MD, Falsen E, Nikolaitchouk N, McCartney AL. Transfer of members of the genus Falcivibrio to the genus Mobiluncus, and emended description of the genus Mobiluncus. Syst Appl Microbiol. 2004 Feb;27(1):72-83. doi: 10.1078/0723-2020-00260.
2002
Hoyles L, Falsen E, Foster G, Collins MD. Actinomyces coleocanis sp. nov., from the vagina of a dog. Int J Syst Evol Microbiol. 2002 Jul;52(Pt 4):1201-1203. doi: 10.1099/00207713-52-4-1201.
Hoyles L, Inganäs E, Falsen E, Drancourt M, Weiss N, McCartney AL, Collins MD. Bifidobacterium scardovii sp. nov., from human sources. Int J Syst Evol Microbiol. 2002 May;52(Pt 3):995-999. doi: 10.1099/00207713-52-3-995.
Hoyles L, Falsen E, Foster G, Rogerson F, Collins MD. Arcanobacterium hippocoleae sp. nov., from the vagina of a horse. Int J Syst Evol Microbiol. 2002 Mar;52(Pt 2):617-619. doi: 10.1099/00207713-52-2-617.
Collins MD, Hoyles L, Foster G, Falsen E, Weiss N. Arthrobacter nasiphocae sp. nov., from the common seal (Phoca vitulina). Int J Syst Evol Microbiol. 2002 Mar;52(Pt 2):569-571. doi: 10.1099/00207713-52-2-569.
2001
Collins MD, Hoyles L, Tornqvist E, von Essen R, Falsen E. Characterization of some strains from human clinical sources which resemble "Leptotrichia sanguinegens": description of Sneathia sanguinegens sp. nov., gen. nov. Syst Appl Microbiol. 2001 Nov;24(3):358-61. doi: 10.1078/0723-2020-00047.
Hoyles L, Foster G, Falsen E, Thomson LF, Collins MD. Facklamia miroungae sp. nov., from a juvenile southern elephant seal (Mirounga leonina). Int J Syst Evol Microbiol. 2001 Jul;51(Pt 4):1401-1403. doi: 10.1099/00207713-51-4-1401.
Collins MD, Hoyles L, Hutson RA, Foster G, Falsen E. Corynebacterium testudinoris sp. nov., from a tortoise, and Corynebacterium felinum sp. nov., from a Scottish wild cat. Int J Syst Evol Microbiol. 2001 Jul;51(Pt 4):1349-1352. doi: 10.1099/00207713-51-4-1349.
Hoyles L, Falsen E, Holmström G, Persson A, Sjödén B, Collins MD. Actinomyces suimastitidis sp. nov., isolated from pig mastitis. Int J Syst Evol Microbiol. 2001 Jul;51(Pt 4):1323-1326. doi: 10.1099/00207713-51-4-1323.
Collins MD, Hoyles L, Foster G, Sjödén B, Falsen E. Corynebacterium capitovis sp. nov., from a sheep. Int J Syst Evol Microbiol. 2001 May;51(Pt 3):857-860. doi: 10.1099/00207713-51-3-857.
Collins MD, Hutson RA, Hoyles L, Falsen E, Nikolaitchouk N, Foster G. Streptococcus ovis sp. nov., isolated from sheep. Int J Syst Evol Microbiol. 2001 May;51(Pt 3):1147-1150. doi: 10.1099/00207713-51-3-1147.
Hoyles L, Falsen E, Pascual C, Sjödén B, Foster G, Henderson D, Collins MD. Actinomyces catuli sp. nov., from dogs. Int J Syst Evol Microbiol. 2001 Mar;51(Pt 2):679-682. doi: 10.1099/00207713-51-2-679.
Foster G, Ritchie C, Cowie RA, Rusbridge SM, Collins MD, Hoyles L. Arcanobacterium/Corynebacterium-like bacterial isolates from sheep. Vet Rec. 2001 Mar 3;148(9):284.
Hoyles L, Pascual C, Falsen E, Foster G, Grainger JM, Collins MD. Actinomyces marimammalium sp. nov., from marine mammals. Int J Syst Evol Microbiol. 2001 Jan;51(Pt 1):151-156. doi: 10.1099/00207713-51-1-151.
2000
Hoyles L, Foster G, Falsen E, Collins MD. Characterization of a Gemella-like organism isolated from an abscess of a rabbit: description of Gemella cunicula sp. nov. Int J Syst Evol Microbiol. 2000 Nov;50 Pt 6:2037-2041. doi: 10.1099/00207713-50-6-2037.
Collins MD, Hoyles L, Kalfas S, Sundquist G, Monsen T, Nikolaitchouk N, Falsen E. Characterization of Actinomyces isolates from infected root canals of teeth: description of Actinomyces radicidentis sp. nov. J Clin Microbiol. 2000 Sep;38(9):3399-403. doi: 10.1128/JCM.38.9.3399-3403.2000.
Nikolaitchouk N, Hoyles L, Falsen E, Grainger JM, Collins MD. Characterization of Actinomyces isolates from samples from the human urogenital tract: description of Actinomyces urogenitalis sp. nov. Int J Syst Evol Microbiol. 2000 Jul;50 Pt 4:1649-1654. doi: 10.1099/00207713-50-4-1649.
Hoyles L, Falsen E, Foster G, Pascual C, Greko C, Collins MD. Actinomyces canis sp. nov., isolated from dogs. Int J Syst Evol Microbiol. 2000 Jul;50 Pt 4:1547-1551. doi: 10.1099/00207713-50-4-1547.
Hoyles L, Lawson PA, Foster G, Falsen E, Ohlén M, Grainger JM, Collins MD. Vagococcus fessus sp. nov., isolated from a seal and a harbour porpoise. Int J Syst Evol Microbiol. 2000 May;50 Pt 3:1151-1154. doi: 10.1099/00207713-50-3-1151.
1999
Collins MD, Hoyles L, Lawson PA, Falsen E, Robson RL, Foster G. Phenotypic and phylogenetic characterization of a new Corynebacterium species from dogs: description of Corynebacterium auriscanis sp. nov. J Clin Microbiol. 1999 Nov;37(11):3443-7. doi: 10.1128/JCM.37.11.3443-3447.1999.
Shah SN, Knausenberger TBA, Connell E, Le Gall G, Hardy TAJ, Randall DW, McCafferty K, Yaqoob MM, Solito E, Müller M, Stachulski AV, Glen RC, Vauzour D, Hoyles L, McArthur S. Cerebrovascular damage caused by the gut microbe/host co-metabolite p-cresol sulfate is prevented by blockade of the EGF receptor. bioRxiv 2022.11.12.516113; doi: 10.1101/2022.11.12.516113v2.
Chilloux J, Brial F, Everard A, Smyth D, Zhang L, Plovier H, Myridakis A, Hoyles L, Fuchs JE, Blancher C, Gencer S, Martinez-Gili L, Fearnside JF, Barton RH, Neves AL, Rothwell AR, Gérard C, Calderari S, Boulangé CL, Patel S, Scott J, Glen RC, Gooderham NJ, Nicholson JK, Gauguier D, Liu PP, Cani PD, Dumas ME. Inhibition of IRAK4 by microbial trimethylamine blunts metabolic inflammation and ameliorates glycemic control. bioRxiv 277434; doi: 10.1101/277434v2.
2024
Hoyles L. Gut microbiome and hepatic steatosis (steatotic liver disease). In Gut Microbiome, Microbial Metabolites and Cardiometabolic Risk, pp. 177–197. Edited by Massimo Federici and Rossella Menghini. Springer Link. doi: 10.1007/978-3-031-35064-1_7.
2023
Walker AW, Hoyles L. Human microbiome myths and misconceptions. Nat Microbiol. 2023 Aug;8(8):1392-1396. doi: 10.1038/s41564-023-01426-7.
Andrikopoulos P, Aron-Wisnewsky J, Chakaroun R, Myridakis A, Forslund SK, Nielsen T, Adriouch S, Holmes B, Chilloux J, Vieira-Silva S, Falony G, Salem JE, Andreelli F, Belda E, Kieswich J, Chechi K, Puig-Castellvi F, Chevalier M, Le Chatelier E, Olanipekun MT, Hoyles L, Alves R, Helft G, Isnard R, Køber L, Coelho LP, Rouault C, Gauguier D, Gøtze JP, Prifti E, Froguel P; MetaCardis Consortium; Zucker JD, Bäckhed F, Vestergaard H, Hansen T, Oppert JM, Blüher M, Nielsen J, Raes J, Bork P, Yaqoob MM, Stumvoll M, Pedersen O, Ehrlich SD, Clément K, Dumas ME. Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide. Nat Commun. 2023 Sep 20;14(1):5843. doi: 10.1038/s41467-023-39824-4.
Molinaro A, Nemet I, Bel Lassen P, Chakaroun R, Nielsen T, Aron-Wisnewsky J, Bergh PO, Li L, Henricsson M, Køber L, Isnard R, Helft G, Stumvoll M, Pedersen O, Smith JG, Tang WHW, Clément K, Hazen SL, Bäckhed F; MetaCardis Consortium. Microbially produced imidazole propionate is associated with heart failure and mortality. JACC Heart Fail. 2023 Jul;11(7):810-821. doi: 10.1016/j.jchf.2023.03.008.
McCartney AL, Hoyles L. The role of Klebsiella populations in preterm infants. Biochem Soc Trans. 51(2):887-896. doi: 10.1042/BST20200325.
Quesada-Vázquez S, Castells-Nobau A, Latorre J, Oliveras-Cañellas N, Puig-Parnau I, Tejera N, Tobajas Y, Baudin J, Hildebrand F, Beraza N, Burcelin R, Martinez-Gili L, Chilloux J, Dumas ME, Federici M, Hoyles L, Caimari A, Del Bas JM, Escoté X, Fernández-Real JM, Mayneris-Perxachs J. Potential therapeutic implications of histidine catabolism by the gut microbiota in NAFLD patients with morbid obesity. Cell Rep Med. 2023 Dec 19;4(12):101341. doi: 10.1016/j.xcrm.2023.101341.
Eladawy M, Thomas JC, Hoyles L. Phenotypic and genomic characterization of Pseudomonas aeruginosa isolates recovered from catheter-associated urinary tract infections in an Egyptian hospital. Microb Genom. 2023 Oct;9(10):001125. doi: 10.1099/mgen.0.001125.
Negus D, Foster G, Hoyles L. Lelliottia amnigena recovered from the lung of a harbour porpoise, and comparative analyses with Lelliottia spp. Access Microbiol. 2023 Nov 9;5(11):000694.v3. doi: 10.1099/acmi.0.000694.v3.
English J, Newberry F, Hoyles L, Patrick S, Stewart L. Genomic analyses of Bacteroides fragilis: subdivisions I and II represent distinct species. J Med Microbiol. 2023 Nov;72(11). doi: 10.1099/jmm.0.001768.
Newberry F, Shibu P, Smith-Zaitlik T, Eladawy M, McCartney AL, Hoyles L, Negus D. Lytic bacteriophage vB_KmiS-Kmi2C disrupts biofilms formed by members of the Klebsiella oxytoca complex, and represents a novel virus family and genus. J Appl Microbiol. 134(4):lxad079. doi: 10.1093/jambio/lxad079.
Alexander JA, Posma JM, Scott A, et al. Pathobionts in the tumour microbiota predict survival following resection for colorectal cancer. Microbiome. 11(1):100. doi: 10.1186/s40168-023-01518-w.
Randall DW, Kieswich J, Hoyles L, McCafferty K, Curtis M, Yaqoob MM. Gut dysbiosis in experimental kidney disease: a meta-analysis of rodent repository data. J Am Soc Nephrol. doi: 10.1681/ASN.0000000000000071.
Stachulski AV, Knausenberger TB, Shah SN, Hoyles L, McArthur S. A host-gut microbial amino acid co-metabolite, p-cresol glucuronide, promotes blood- brain barrier integrity in vivo. Tissue Barriers. 2023 Jan 2;11(1):2073175. doi: 10.1080/21688370.2022.2073175.
2022
Penney NC, Yeung DKT, Garcia-Perez I, Posma JM, Kopytek A, Garratt B, Ashrafian H, Frost G, Marchesi JR, Purkayastha S, Hoyles L, Darzi A, Holmes E. Multi-omic phenotyping reveals host-microbe responses to bariatric surgery, glycaemic control and obesity. Commun Med (Lond). 2022 Oct 7;2:127. doi: 10.1038/s43856-022-00185-6.
Smith-Zaitlik T, Shibu P, McCartney AL, Foster G, Hoyles L, Negus D. Extended genomic analyses of the broad-host-range phages vB_KmiM-2Di and vB_KmiM-4Dii reveal slopekviruses have highly conserved genomes. Microbiology (Reading). 2022 Sep;168(9). doi: 10.1099/mic.0.001247.
Noble A, Pring ET, Durant L, Man R, Dilke SM, Hoyles L, James SA, Carding SR, Jenkins JT, Knight SC. Altered immunity to microbiota, B cell activation and depleted γδ/resident memory T cells in colorectal cancer. Cancer Immunol Immunother. 2022 Nov;71(11):2619-2629. doi: 10.1007/s00262-021-03135-8.
Noble A, Durant L, Dilke SM, Man R, Martin I, Patel R, Hoyles L, Pring ET, Latchford A, Clark SK, Carding SR, Knight SC. Altered mucosal immune-microbiota interactions in familial adenomatous polyposis. Clin Transl Gastroenterol. 2022 Jul 1;13(7):e00428. doi: 10.14309/ctg.0000000000000428.
Fromentin S, Forslund SK, Chechi K, Aron-Wisnewsky J, Chakaroun R, Nielsen T, Tremaroli V, Ji B, Prifti E, Myridakis A, Chilloux J, Andrikopoulos P, Fan Y, Olanipekun MT, Alves R, Adiouch S, Bar N, Talmor-Barkan Y, Belda E, Caesar R, Coelho LP, Falony G, Fellahi S, Galan P, Galleron N, Helft G, Hoyles L, Isnard R, Le Chatelier E, Julienne H, Olsson L, Pedersen HK, Pons N, Quinquis B, Rouault C, Roume H, Salem JE, Schmidt TSB, Vieira-Silva S, Li P, Zimmermann- Kogadeeva M, Lewinter C, Søndertoft NB, Hansen TH, Gauguier D, Gøtze JP, Køber L, Kornowski R, Vestergaard H, Hansen T, Zucker JD, Hercberg S, Letunic I, Bäckhed F, Oppert JM, Nielsen J, Raes J, Bork P, Stumvoll M, Segal E, Clément K, Dumas ME, Ehrlich SD, Pedersen O. Microbiome and metabolome features of the cardiometabolic disease spectrum. Nat Med. 2022 Feb;28(2):303-314. doi: 10.1038/s41591-022-01688-4.
Menghini R, Hoyles L, Cardellini M, Casagrande V, Marino A, Gentileschi P, Davato F, Mavilio M, Arisi I, Mauriello A, Montanaro M, Scimeca M, Barton RH, Rappa F, Cappello F, Vinciguerra M, Moreno-Navarrete JM, Ricart W, Porzio O, Fernández-Real JM, Burcelin R, Dumas ME, Federici M. ITCH E3 ubiquitin ligase downregulation compromises hepatic degradation of branched-chain amino acids. Mol Metab. 2022 May;59:101454. doi: 10.1016/j.molmet.2022.101454.
Chakrabarti A, Geurts L, Hoyles L, Iozzo P, Kraneveld AD, La Fata G, Miani M, Patterson E, Pot B, Shortt C, Vauzour D. The microbiota-gut-brain axis: pathways to better brain health. Perspectives on what we know, what we need to investigate and how to put knowledge into practice. Cell Mol Life Sci. 2022 Jan 19;79(2):80. doi: 10.1007/s00018-021-04060-w.
Belda E, Voland L, Tremaroli V, Falony G, Adriouch S, Assmann KE, Prifti E, Aron-Wisnewsky J, Debédat J, Le Roy T, Nielsen T, Amouyal C, André S, Andreelli F, Blüher M, Chakaroun R, Chilloux J, Coelho LP, Dao MC, Das P, Fellahi S, Forslund S, Galleron N, Hansen TH, Holmes B, Ji B, Krogh Pedersen H, Le P, Le Chatelier E, Lewinter C, Mannerås-Holm L, Marquet F, Myridakis A, Pelloux V, Pons N, Quinquis B, Rouault C, Roume H, Salem JE, Sokolovska N, Søndertoft NB, Touch S, Vieira-Silva S; MetaCardis Consortium; Galan P, Holst J, Gøtze JP, Køber L, Vestergaard H, Hansen T, Hercberg S, Oppert JM, Nielsen J, Letunic I, Dumas ME, Stumvoll M, Pedersen OB, Bork P, Ehrlich SD, Zucker JD, Bäckhed F, Raes J, Clément K. Impairment of gut microbial biotin metabolism and host biotin status in severe obesity: effect of biotin and prebiotic supplementation on improved metabolism. Gut. 2022 Dec;71(12):2463-2480. doi: 10.1136/gutjnl-2021-325753.
2021
Vrijheid M, Basagaña X, Gonzalez JR, Jaddoe VWV, Jensen G, Keun HC, McEachan RRC, Porcel J, Siroux V, Swertz MA, Thomsen C, Aasvang GM, Andrušaitytė S, Angeli K, Avraam D, Ballester F, Burton P, Bustamante M, Casas M, Chatzi L, Chevrier C, Cingotti N, Conti D, Crépet A, Dadvand P, Duijts L, van Enckevort E, Esplugues A, Fossati S, Garlantezec R, Gómez Roig MD, Grazuleviciene R, Gützkow KB, Guxens M, Haakma S, Hessel EVS, Hoyles L, Hyde E, Klanova J, van Klaveren JD, Kortenkamp A, Le Brusquet L, Leenen I, Lertxundi A, Lertxundi N, Lionis C, Llop S, Lopez-Espinosa MJ, Lyon-Caen S, Maitre L, Mason D, Mathy S, Mazarico E, Nawrot T, Nieuwenhuijsen M, Ortiz R, Pedersen M, Perelló J, Pérez-Cruz M, Philippat C, Piler P, Pizzi C, Quentin J, Richiardi L, Rodriguez A, Roumeliotaki T, Sabin Capote JM, Santiago L, Santos S, Siskos AP, Strandberg-Larsen K, Stratakis N, Sunyer J, Tenenhaus A, Vafeiadi M, Wilson RC, Wright J, Yang T, Slama R. Advancing tools for human early lifecourse exposome research and translation (ATHLETE): project overview. Environ Epidemiol. 2021 Oct 1;5(5):e166. doi: 10.1097/EE9.0000000000000166.
Forslund SK, Chakaroun R, Zimmermann-Kogadeeva M, Markó L, Aron-Wisnewsky J, Nielsen T, Moitinho-Silva L, Schmidt TSB, Falony G, Vieira-Silva S, Adriouch S, Alves RJ, Assmann K, Bastard JP, Birkner T, Caesar R, Chilloux J, Coelho LP, Fezeu L, Galleron N, Helft G, Isnard R, Ji B, Kuhn M, Le Chatelier E, Myridakis A, Olsson L, Pons N, Prifti E, Quinquis B, Roume H, Salem JE, Sokolovska N, Tremaroli V, Valles-Colomer M, Lewinter C, Søndertoft NB, Pedersen HK, Hansen TH; MetaCardis Consortium; Gøtze JP, Køber L, Vestergaard H, Hansen T, Zucker JD, Hercberg S, Oppert JM, Letunic I, Nielsen J, Bäckhed F, Ehrlich SD, Dumas ME, Raes J, Pedersen O, Clément K, Stumvoll M, Bork P. Combinatorial, additive and dose-dependent drug-microbiome associations. Nature. 2021 Dec;600(7889):500-505. doi: 10.1038/s41586-021-04177-9.
Hoyles L, Pontifex MG, Rodriguez-Ramiro I, Anis-Alavi MA, Jelane KS, Snelling T, Solito E, Fonseca S, Carvalho AL, Carding SR, Müller M, Glen RC, Vauzour D, McArthur S. Regulation of blood-brain barrier integrity by microbiome-associated methylamines and cognition by trimethylamine N-oxide. Microbiome. 2021 Nov 27;9(1):235. doi: 10.1186/s40168-021-01181-z.
Nalpas N, Hoyles L, Anselm V, Ganief T, Martinez-Gili L, Grau C, Droste- Borel I, Davidovic L, Altafaj X, Dumas ME, Macek B. An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome. Gut Microbes. 2021 Jan-Dec;13(1):1994836. doi: 10.1080/19490976.2021.1994836.
Hsieh SY, Tariq MA, Telatin A, Ansorge R, Adriaenssens EM, Savva GM, Booth C, Wileman T, Hoyles L, Carding SR. Comparison of PCR versus PCR-free DNA library preparation for characterising the human faecal virome. Viruses. 2021 Oct 18;13(10):2093. doi: 10.3390/v13102093.
Shibu P, McCuaig F, McCartney AL, Kujawska M, Hall LJ, Hoyles L. Improved molecular characterization of the Klebsiella oxytoca complex reveals the prevalence of the kleboxymycin biosynthetic gene cluster. Microb Genom. 2021 Jun;7(6):000592. doi: 10.1099/mgen.0.000592.
Mayneris-Perxachs J, Cardellini M, Hoyles L, Latorre J, Davato F, Moreno- Navarrete JM, Arnoriaga-Rodríguez M, Serino M, Abbott J, Barton RH, Puig J, Fernández-Real X, Ricart W, Tomlinson C, Woodbridge M, Gentileschi P, Butcher SA, Holmes E, Nicholson JK, Pérez-Brocal V, Moya A, Clain DM, Burcelin R, Dumas ME, Federici M, Fernández-Real JM. Iron status influences non-alcoholic fatty liver disease in obesity through the gut microbiome. Microbiome. 2021 May 7;9(1):104. doi: 10.1186/s40168-021-01052-7.
2020
Brial F, Chilloux J, Nielsen T, Vieira-Silva S, Falony G, Andrikopoulos P, Olanipekun M, Hoyles L, Djouadi F, Neves AL, Rodriguez-Martinez A, Mouawad GI, Pons N, Forslund S, Le-Chatelier E, Le Lay A, Nicholson J, Hansen T, Hyötyläinen T, Clément K, Oresic M, Bork P, Ehrlich SD, Raes J, Pedersen OB, Gauguier D, Dumas ME. Human and preclinical studies of the host-gut microbiome co-metabolite hippurate as a marker and mediator of metabolic health. Gut. 2021 Nov;70(11):2105-2114. doi: 10.1136/gutjnl-2020-323314.
Tariq MA, Newberry F, Haagmans R, Booth C, Wileman T, Hoyles L, Clokie MRJ, Ebdon J, Carding SR. Genome characterization of a novel wastewater Bacteroides fragilis bacteriophage (vB_BfrS_23) and its host GB124. Front Microbiol. 2020 Oct 23;11:583378. doi: 10.3389/fmicb.2020.583378.
D'Amato A, Di Cesare Mannelli L, Lucarini E, Man AL, Le Gall G, Branca JJV, Ghelardini C, Amedei A, Bertelli E, Regoli M, Pacini A, Luciani G, Gallina P, Altera A, Narbad A, Gulisano M, Hoyles L, Vauzour D, Nicoletti C. Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients. Microbiome. 2020 Oct 1;8(1):140. doi: 10.1186/s40168-020-00914-w.
Kujawska M, La Rosa SL, Roger LC, Pope PB, Hoyles L, McCartney AL, Hall LJ. Succession of Bifidobacterium longum strains in response to a changing early life nutritional environment reveals dietary substrate adaptations. iScience. 2020 Aug 21;23(8):101368. doi: 10.1016/j.isci.2020.101368.
Letertre MPM, Munjoma N, Wolfer K, Pechlivanis A, McDonald JAK, Hardwick RN, Cherrington NJ, Coen M, Nicholson JK, Hoyles L, Swann JR, Wilson ID. A Two-Way interaction between methotrexate and the gut microbiota of male Sprague-Dawley rats. J Proteome Res. 2020 Aug 7;19(8):3326-3339. doi: 10.1021/acs.jproteome.0c00230.
Durant L, Stentz R, Noble A, Brooks J, Gicheva N, Reddi D, O'Connor MJ, Hoyles L, McCartney AL, Man R, Pring ET, Dilke S, Hendy P, Segal JP, Lim DNF, Misra R, Hart AL, Arebi N, Carding SR, Knight SC. Bacteroides thetaiotaomicron- derived outer membrane vesicles promote regulatory dendritic cell responses in health but not in inflammatory bowel disease. Microbiome. 2020 Jun 8;8(1):88. doi: 10.1186/s40168-020-00868-z.
Chen Y, Brook TC, Soe CZ, O'Neill I, Alcon-Giner C, Leelastwattanagul O, Phillips S, Caim S, Clarke P, Hall LJ, Hoyles L. Preterm infants harbour diverse Klebsiella populations, including atypical species that encode and produce an array of antimicrobial resistance- and virulence-associated factors. Microb Genom. 2020 Jun;6(6):e000377. doi: 10.1099/mgen.0.000377.
Mayneris-Perxachs J, Puig J, Burcelin R, Dumas ME, Barton RH, Hoyles L, Federici M, Fernández-Real JM. The APOA1bp-SREBF-NOTCH axis is associated with reduced atherosclerosis risk in morbidly obese patients. Clin Nutr. 2020 Nov;39(11):3408-3418. doi: 10.1016/j.clnu.2020.02.034.
Herridge WP, Shibu P, O'Shea J, Brook TC, Hoyles L. Bacteriophages of Klebsiella spp., their diversity and potential therapeutic uses. J Med Microbiol. 2020 Feb;69(2):176-194. doi: 10.1099/jmm.0.001141.
Leggett RM, Alcon-Giner C, Heavens D, Caim S, Brook TC, Kujawska M, Martin S, Peel N, Acford-Palmer H, Hoyles L, Clarke P, Hall LJ, Clark MD. Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens. Nat Microbiol. 2020 Mar;5(3):430-442. doi: 10.1038/s41564-019-0626-z.
Noble A, Durant L, Hoyles L, McCartney AL, Man R, Segal J, Costello SP, Hendy P, Reddi D, Bouri S, Lim DNF, Pring T, O'Connor MJ, Datt P, Wilson A, Arebi N, Akbar A, Hart AL, Carding SR, Knight SC. Deficient resident memory T cell and CD8 T cell response to commensals in inflammatory bowel disease. J Crohns Colitis. 2020 May 21;14(4):525-537. doi: 10.1093/ecco-jcc/jjz175.
2019
Randall DW, Kieswich J, Swann J, McCafferty K, Thiemermann C, Curtis M, Hoyles L, Yaqoob MM. Batch effect exerts a bigger influence on the rat urinary metabolome and gut microbiota than uraemia: a cautionary tale. Microbiome. 2019 Sep 2;7(1):127. doi: 10.1186/s40168-019-0738-y.
Hoyles L. Spotlight on… Lesley Hoyles. FEMS Microbiol Lett. 2019 Jul 1;366(13):fnz156. doi: 10.1093/femsle/fnz156.
Chen Y, Brook TC, Alcon-Giner C, Clarke P, Hall LJ, Hoyles L. Draft genome sequences of Citrobacter freundii and Citrobacter murliniae strains isolated from the feces of preterm infants. Microbiol Resour Announc. 2019 Aug 15;8(33):e00494-19. doi: 10.1128/MRA.00494-19.
Chen Y, Brook TC, Alcon-Giner C, Clarke P, Hall LJ, Hoyles L. Draft genome sequence of Raoultella ornithinolytica P079F W, isolated from the feces of a preterm infant. Microbiol Resour Announc. 2019 Aug 15;8(33):e00493-19. doi: 10.1128/MRA.00493-19.
Dao MC, Sokolovska N, Brazeilles R, Affeldt S, Pelloux V, Prifti E, Chilloux J, Verger EO, Kayser BD, Aron-Wisnewsky J, Ichou F, Pujos-Guillot E, Hoyles L, Juste C, Doré J, Dumas ME, Rizkalla SW, Holmes BA, Zucker JD, Clément K; MICRO-Obes Consortium. A data integration multi-omics approach to study calorie restriction-induced changes in insulin sensitivity. Front Physiol. 2019 Feb 5;9:1958. doi: 10.3389/fphys.2018.01958.
2018
Hoyles L, Fernández-Real JM, Federici M, Serino M, Abbott J, Charpentier J, Heymes C, Luque JL, Anthony E, Barton RH, Chilloux J, Myridakis A, Martinez-Gili L, Moreno-Navarrete JM, Benhamed F, Azalbert V, Blasco-Baque V, Puig J, Xifra G, Ricart W, Tomlinson C, Woodbridge M, Cardellini M, Davato F, Cardolini I, Porzio O, Gentileschi P, Lopez F, Foufelle F, Butcher SA, Holmes E, Nicholson JK, Postic C, Burcelin R, Dumas ME. Molecular phenomics and metagenomics of hepatic steatosis in non-diabetic obese women. Nat Med. 2018 Jul;24(7):1070-1080. doi: 10.1038/s41591-018-0061-3.
Hoyles L, Jiménez-Pranteda ML, Chilloux J, Brial F, Myridakis A, Aranias T, Magnan C, Gibson GR, Sanderson JD, Nicholson JK, Gauguier D, McCartney AL, Dumas ME. Metabolic retroconversion of trimethylamine N-oxide and the gut microbiota. Microbiome. 2018 Apr 20;6(1):73. doi: 10.1186/s40168-018-0461-0.
Hoyles L, Snelling T, Umlai UK, Nicholson JK, Carding SR, Glen RC, McArthur S. Microbiome-host systems interactions: protective effects of propionate upon the blood-brain barrier. Microbiome. 2018 Mar 21;6(1):55. doi: 10.1186/s40168-018-0439-y.
2017
Carding SR, Davis N, Hoyles L. Review article: the human intestinal virome in health and disease. Aliment Pharmacol Ther. 2017 Nov;46(9):800-815. doi: 10.1111/apt.14280.
Dumas ME, Rothwell AR, Hoyles L, Aranias T, Chilloux J, Calderari S, Noll EM, Péan N, Boulangé CL, Blancher C, Barton RH, Gu Q, Fearnside JF, Deshayes C, Hue C, Scott J, Nicholson JK, Gauguier D. Microbial-Host Co-metabolites Are Prodromal Markers Predicting Phenotypic Heterogeneity in Behavior, Obesity, and Impaired Glucose Tolerance. Cell Rep. 2017 Jul 5;20(1):136-148. doi: 10.1016/j.celrep.2017.06.039.
2016
Bell ME, Lasker BA, Klenk HP, Hoyles L, Spröer C, Schumann P, Brown JM. Kroppenstedtia pulmonis sp. nov. and Kroppenstedtia sanguinis sp. nov., isolated from human patients. Antonie Van Leeuwenhoek. 2016 May;109(5):603-10. doi: 10.1007/s10482-016-0663-z.
Dao MC, Everard A, Aron-Wisnewsky J, Sokolovska N, Prifti E, Verger EO, Kayser BD, Levenez F, Chilloux J, Hoyles L; MICRO-Obes Consortium; Dumas ME, Rizkalla SW, Doré J, Cani PD, Clément K. Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology. Gut. 2016 Mar;65(3):426-36. doi: 10.1136/gutjnl-2014-308778.
2015
Hoyles L, Murphy J, Neve H, Heller KJ, Turton JF, Mahony J, Sanderson JD, Hudspith B, Gibson GR, McCartney AL, van Sinderen D. Klebsiella pneumoniae subsp. pneumoniae-bacteriophage combination from the caecal effluent of a healthy woman. PeerJ. 2015 Jul 28;3:e1061. doi: 10.7717/peerj.1061.
Shoaie S, Ghaffari P, Kovatcheva-Datchary P, Mardinoglu A, Sen P, Pujos- Guillot E, de Wouters T, Juste C, Rizkalla S, Chilloux J, Hoyles L, Nicholson JK; MICRO-Obes Consortium; Dore J, Dumas ME, Clement K, Bäckhed F, Nielsen J. Quantifying diet-induced metabolic changes of the human gut microbiome. Cell Metab. 2015 Aug 4;22(2):320-31. doi: 10.1016/j.cmet.2015.07.001.
Thorasin T, Hoyles L, McCartney AL. Dynamics and diversity of the 'Atopobium cluster' in the human faecal microbiota, and phenotypic characterization of 'Atopobium cluster' isolates. Microbiology (Reading). 2015 Mar;161(Pt 3):565-79. doi: 10.1099/mic.0.000016.
2014
Hoyles L, McCartney AL, Neve H, Gibson GR, Sanderson JD, Heller KJ, van Sinderen D. Characterization of virus-like particles associated with the human faecal and caecal microbiota. Res Microbiol. 2014 Dec;165(10):803-12. doi: 10.1016/j.resmic.2014.10.006.
2013
Russell WR, Hoyles L, Flint HJ, Dumas ME. Colonic bacterial metabolites and human health. Curr Opin Microbiol. 2013 Jun;16(3):246-54. doi: 10.1016/j.mib.2013.07.002.
Murphy J, Royer B, Mahony J, Hoyles L, Heller K, Neve H, Bonestroo M, Nauta A, van Sinderen D. Biodiversity of lactococcal bacteriophages isolated from 3 Gouda-type cheese-producing plants. J Dairy Sci. 2013 Aug;96(8):4945-57. doi: 10.3168/jds.2013-6748.
Hoyles L, Clear JA, McCartney AL. Use of denaturing gradient gel electrophoresis to detect Actinobacteria associated with the human faecal microbiota. Anaerobe. 2013 Aug;22:90-6. doi: 10.1016/j.anaerobe.2013.06.001.
Hoyles L, Ortman K, Cardew S, Foster G, Rogerson F, Falsen E. Corynebacterium uterequi sp. nov., a non-lipophilic bacterium isolated from urogenital samples from horses. Vet Microbiol. 2013 Aug 30;165(3-4):469-74. doi: 10.1016/j.vetmic.2013.03.025.
2012
Jiménez-Pranteda ML, Aguilera M, McCartney AL, Hoyles L, Jiménez-Valera M, Náder-Macías ME, Ramos-Cormenzana A, Monteoliva-Sánchez M. Investigation of the impact of feeding Lactobacillus plantarum CRL 1815 encapsulated in microbially derived polymers on the rat faecal microbiota. J Appl Microbiol. 2012 Aug;113(2):399-410. doi: 10.1111/j.1365-2672.2012.05343.x.
Foster G, Wragg P, Koylass MS, Whatmore AM, Hoyles L. Isolation of Actinomyces hyovaginalis from sheep and comparison with isolates obtained from pigs. Vet Microbiol. 2012 Jun 15;157(3-4):471-5. doi: 10.1016/j.vetmic.2012.01.003.
Hoyles L, Honda H, Logan NA, Halket G, La Ragione RM, McCartney AL. Recognition of greater diversity of Bacillus species and related bacteria in human faeces. Res Microbiol. 2012 Jan;163(1):3-13. doi: 10.1016/j.resmic.2011.10.004.
2011
Ogué-Bon E, Khoo C, Hoyles L, McCartney AL, Gibson GR, Rastall RA. In vitro fermentation of rice bran combined with Lactobacillus acidophilus 14 150B or Bifidobacterium longum 05 by the canine faecal microbiota. FEMS Microbiol Ecol. 2011 Mar;75(3):365-76. doi: 10.1111/j.1574-6941.2010.01014.x.
2010
Roberfroid M, Gibson GR, Hoyles L, McCartney AL, Rastall R, Rowland I, Wolvers D, Watzl B, Szajewska H, Stahl B, Guarner F, Respondek F, Whelan K, Coxam V, Davicco MJ, Léotoing L, Wittrant Y, Delzenne NM, Cani PD, Neyrinck AM, Meheust A. Prebiotic effects: metabolic and health benefits. Br J Nutr. 2010 Aug;104 Suppl 2:S1-63. doi: 10.1017/S0007114510003363.
Roger LC, Costabile A, Holland DT, Hoyles L, McCartney AL. Examination of faecal Bifidobacterium populations in breast- and formula-fed infants during the first 18 months of life. Microbiology (Reading). 2010 Nov;156(Pt 11):3329-3341. doi: 10.1099/mic.0.043224-0.
Martín-Peláez S, Costabile A, Hoyles L, Rastall RA, Gibson GR, La Ragione RM, Woodward MJ, Mateu E, Martín-Orúe SM. Evaluation of the inclusion of a mixture of organic acids or lactulose into the feed of pigs experimentally challenged with Salmonella Typhimurium. Vet Microbiol. 2010 May 19;142(3-4):337-45. doi: 10.1016/j.vetmic.2009.09.061.
2009
Hoyles L, McCartney AL. What do we mean when we refer to Bacteroidetes populations in the human gastrointestinal microbiota? FEMS Microbiol Lett. 2009 Oct;299(2):175-83. doi: 10.1111/j.1574-6968.2009.01741.x.
2008
Hoyles L, Vulevic J. Diet, immunity and functional foods. Adv Exp Med Biol. 2008;635:79-92. doi: 10.1007/978-0-387-09550-9_7.
2007
Tuohy KM, Pinart-Gilberga M, Jones M, Hoyles L, McCartney AL, Gibson GR. Survivability of a probiotic Lactobacillus casei in the gastrointestinal tract of healthy human volunteers and its impact on the faecal microflora. J Appl Microbiol. 2007 Apr;102(4):1026-32. doi: 10.1111/j.1365-2672.2006.03154.x.
2004
Euzéby JP, Hoyles L, Kämpfer P, Oren A, Saddler GS, Trüper HG, Tindall BJ. 'List of Changes in Taxonomic Opinion': making use of the new lists. Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1429-1430. doi: 10.1099/ijs.0.63375-0.
Collins MD, Hoyles L, Foster G, Falsen E. Corynebacterium caspium sp. nov., from a Caspian seal (Phoca caspica). Int J Syst Evol Microbiol. 2004 May;54(Pt 3):925-928. doi: 10.1099/ijs.0.02950-0.
Hoyles L, Collins MD, Foster G, Falsen E, Schumann P. Jeotgalicoccus pinnipedialis sp. nov., from a southern elephant seal (Mirounga leonina). Int J Syst Evol Microbiol. 2004 May;54(Pt 3):745-748. doi: 10.1099/ijs.0.02833-0.
Hoyles L, Collins MD, Falsen E, Nikolaitchouk N, McCartney AL. Transfer of members of the genus Falcivibrio to the genus Mobiluncus, and emended description of the genus Mobiluncus. Syst Appl Microbiol. 2004 Feb;27(1):72-83. doi: 10.1078/0723-2020-00260.
2002
Hoyles L, Falsen E, Foster G, Collins MD. Actinomyces coleocanis sp. nov., from the vagina of a dog. Int J Syst Evol Microbiol. 2002 Jul;52(Pt 4):1201-1203. doi: 10.1099/00207713-52-4-1201.
Hoyles L, Inganäs E, Falsen E, Drancourt M, Weiss N, McCartney AL, Collins MD. Bifidobacterium scardovii sp. nov., from human sources. Int J Syst Evol Microbiol. 2002 May;52(Pt 3):995-999. doi: 10.1099/00207713-52-3-995.
Hoyles L, Falsen E, Foster G, Rogerson F, Collins MD. Arcanobacterium hippocoleae sp. nov., from the vagina of a horse. Int J Syst Evol Microbiol. 2002 Mar;52(Pt 2):617-619. doi: 10.1099/00207713-52-2-617.
Collins MD, Hoyles L, Foster G, Falsen E, Weiss N. Arthrobacter nasiphocae sp. nov., from the common seal (Phoca vitulina). Int J Syst Evol Microbiol. 2002 Mar;52(Pt 2):569-571. doi: 10.1099/00207713-52-2-569.
2001
Collins MD, Hoyles L, Tornqvist E, von Essen R, Falsen E. Characterization of some strains from human clinical sources which resemble "Leptotrichia sanguinegens": description of Sneathia sanguinegens sp. nov., gen. nov. Syst Appl Microbiol. 2001 Nov;24(3):358-61. doi: 10.1078/0723-2020-00047.
Hoyles L, Foster G, Falsen E, Thomson LF, Collins MD. Facklamia miroungae sp. nov., from a juvenile southern elephant seal (Mirounga leonina). Int J Syst Evol Microbiol. 2001 Jul;51(Pt 4):1401-1403. doi: 10.1099/00207713-51-4-1401.
Collins MD, Hoyles L, Hutson RA, Foster G, Falsen E. Corynebacterium testudinoris sp. nov., from a tortoise, and Corynebacterium felinum sp. nov., from a Scottish wild cat. Int J Syst Evol Microbiol. 2001 Jul;51(Pt 4):1349-1352. doi: 10.1099/00207713-51-4-1349.
Hoyles L, Falsen E, Holmström G, Persson A, Sjödén B, Collins MD. Actinomyces suimastitidis sp. nov., isolated from pig mastitis. Int J Syst Evol Microbiol. 2001 Jul;51(Pt 4):1323-1326. doi: 10.1099/00207713-51-4-1323.
Collins MD, Hoyles L, Foster G, Sjödén B, Falsen E. Corynebacterium capitovis sp. nov., from a sheep. Int J Syst Evol Microbiol. 2001 May;51(Pt 3):857-860. doi: 10.1099/00207713-51-3-857.
Collins MD, Hutson RA, Hoyles L, Falsen E, Nikolaitchouk N, Foster G. Streptococcus ovis sp. nov., isolated from sheep. Int J Syst Evol Microbiol. 2001 May;51(Pt 3):1147-1150. doi: 10.1099/00207713-51-3-1147.
Hoyles L, Falsen E, Pascual C, Sjödén B, Foster G, Henderson D, Collins MD. Actinomyces catuli sp. nov., from dogs. Int J Syst Evol Microbiol. 2001 Mar;51(Pt 2):679-682. doi: 10.1099/00207713-51-2-679.
Foster G, Ritchie C, Cowie RA, Rusbridge SM, Collins MD, Hoyles L. Arcanobacterium/Corynebacterium-like bacterial isolates from sheep. Vet Rec. 2001 Mar 3;148(9):284.
Hoyles L, Pascual C, Falsen E, Foster G, Grainger JM, Collins MD. Actinomyces marimammalium sp. nov., from marine mammals. Int J Syst Evol Microbiol. 2001 Jan;51(Pt 1):151-156. doi: 10.1099/00207713-51-1-151.
2000
Hoyles L, Foster G, Falsen E, Collins MD. Characterization of a Gemella-like organism isolated from an abscess of a rabbit: description of Gemella cunicula sp. nov. Int J Syst Evol Microbiol. 2000 Nov;50 Pt 6:2037-2041. doi: 10.1099/00207713-50-6-2037.
Collins MD, Hoyles L, Kalfas S, Sundquist G, Monsen T, Nikolaitchouk N, Falsen E. Characterization of Actinomyces isolates from infected root canals of teeth: description of Actinomyces radicidentis sp. nov. J Clin Microbiol. 2000 Sep;38(9):3399-403. doi: 10.1128/JCM.38.9.3399-3403.2000.
Nikolaitchouk N, Hoyles L, Falsen E, Grainger JM, Collins MD. Characterization of Actinomyces isolates from samples from the human urogenital tract: description of Actinomyces urogenitalis sp. nov. Int J Syst Evol Microbiol. 2000 Jul;50 Pt 4:1649-1654. doi: 10.1099/00207713-50-4-1649.
Hoyles L, Falsen E, Foster G, Pascual C, Greko C, Collins MD. Actinomyces canis sp. nov., isolated from dogs. Int J Syst Evol Microbiol. 2000 Jul;50 Pt 4:1547-1551. doi: 10.1099/00207713-50-4-1547.
Hoyles L, Lawson PA, Foster G, Falsen E, Ohlén M, Grainger JM, Collins MD. Vagococcus fessus sp. nov., isolated from a seal and a harbour porpoise. Int J Syst Evol Microbiol. 2000 May;50 Pt 3:1151-1154. doi: 10.1099/00207713-50-3-1151.
1999
Collins MD, Hoyles L, Lawson PA, Falsen E, Robson RL, Foster G. Phenotypic and phylogenetic characterization of a new Corynebacterium species from dogs: description of Corynebacterium auriscanis sp. nov. J Clin Microbiol. 1999 Nov;37(11):3443-7. doi: 10.1128/JCM.37.11.3443-3447.1999.
